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MolNFT v1 · #151404 · protein

Ternary complex of estrogen receptor alpha peptide and 14-3-3 sigma C45 mutant bound to disulfide fragment ppi stabilizer 6

6HMU · 14-3-3 protein sigma: “Ternary complex of estrogen receptor alpha peptide and 14-3-3 sigma C45 mutant bound to disulfide fragment…”. X-ray diffraction, 2 ligands (GE8, MG), 2 pockets (best druggability 0.53). MolNFT v1 #151404 on…

PDB
6HMU
Type
protein
Length
241 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
14-3-3 protein sigma; Estrogen receptor
UniProt
P31947, P03372
Ligands
GE8, MG
Pockets
2 · best druggability 0.53

Structure

x-ray diffraction · 2 distinct chains · 78% helix, 0% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
A14-3-3 protein sigmaprotein23680% helix, 0% strandP31947
BEstrogen receptorprotein50% helix, 0% strandP03372

Ligands and binding sites

  • GE8 · 2-(4-chloranylphenoxy)-2-methyl-~{N}-(3-sulfanylpropyl)propanamide · ligand · chains A, B
  • MG · Magnesium ion · metal · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
11490.530.8020GE8
2650.350.7716empty

Interfaces

1 interface between chains.

  • A–B · 457 Ų buried · 10 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 1 covalent, 1 modified (covalent ligand, phosphorylation).

Compared structures

  • 6HMU · Ternary complex of Estrogen Receptor alpha peptide and 14-3-3 sigma C45 mutant bound to… · the same entry in another collection · chain A against A, TM-score 1.00
  • P31947 · AlphaFold monomer V2.0 prediction for 14-3-3 protein sigma (P31947) · a predicted model of the same protein · chain A against A, TM-score 0.95
  • P03372 · AlphaFold monomer V2.0 prediction for estrogen receptor (P03372) · a predicted model of the same protein · chain B against A, TM-score 0.94

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