MolNFT v1 · #151154 · protein

The structure of BOMAN26B, a GH26 beta-mannanase from bacteroides ovatus, complexed with G1M4

6HF4 · Glycosyl hydrolase family 26: “The structure of BOMAN26B, a GH26 beta-mannanase from bacteroides ovatus, complexed with G1M4”. X-ray diffraction, 4 ligands (BMA, GLA, CA), 1 pocket (best druggability 0.30). MolNFT v1 #151154 on…

PDB: 6HF4
Type: protein
Length: 325 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Glycosyl hydrolase family 26
UniProt: A7LW89
Ligands: BMA, GLA, CA, CL
Pockets: 1 · best druggability 0.30

Structure

x-ray diffraction · 1 distinct chain · 38% helix, 19% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Glycosyl hydrolase family 26	protein	325	38% helix, 19% strand	A7LW89

Ligands and binding sites

BMA · beta-D-mannopyranose · sugar · 4 copies · chains A
GLA · alpha-D-galactopyranose · sugar · chains A
CA · Calcium ion · metal · chains A
CL · Chloride ion · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	80	0.30	0.72	18	BMA

Compared structures

6HF4 · The structure of BoMan26B, a GH26 beta-mannanase from Bacteroides ovatus, complexed with… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A7LW89
Elsewhere: RCSB PDB 6HF4 · PDBe 6HF4 · UniProt A7LW89

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