MolNFT v1 · #150869 · protein

Ubij-SCP2 ubiquinone synthesis protein

6H6O: “Ubij-SCP2 ubiquinone synthesis protein”. X-ray diffraction, 2 ligands (LMR, CA). MolNFT v1 #150869 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6H6O
Type: protein
Length: 237 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: P0ADP7
Ligands: LMR, CA

Structure

x-ray diffraction · 2 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	121	—	P0ADP7
B	—	protein	116	—	P0ADP7

Ligands and binding sites

LMR · (2S)-2-hydroxybutanedioic acid · ligand · 2 copies · chains A, B
CA · Calcium ion · metal · 7 copies · chains A, B
PEG · Di(hydroxyethyl)ether · additive · 3 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6H6O · UbiJ-SCP2 Ubiqui synthesis protein · the same entry in another collection · chain B against B, TM-score 1.00
P0ADP7 · AlphaFold monomer V2.0 prediction for ubiquinone biosynthesis accessory factor ubij… · a predicted model of the same protein · chain B against A, TM-score 0.96

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P0ADP7
Elsewhere: RCSB PDB 6H6O · PDBe 6H6O · UniProt P0ADP7

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