MolNFT v1 · #150797 · protein
USP28 catalytic domain variant E593D in complex with ubpa
6H4H: “USP28 catalytic domain variant E593D in complex with ubpa”. X-ray diffraction, 2 ligands (AYE, SO4). MolNFT v1 #150797 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6H4H
- Type
- protein
- Length
- 1,028 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q96RU2, P0CG47
- Ligands
- AYE, SO4
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 458 | — | Q96RU2 |
| B | — | protein | 420 | — | Q96RU2 |
| C, D | — | protein | 75 | — | P0CG47 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6H4H · Usp28 catalytic domain variant E593D in complex with UbPA · the same entry in another collection · chain A against A, TM-score 1.00
- Q96RU2 · AlphaFold monomer V2.0 prediction for ubiquitin carboxyl-terminal hydrolase 28 (Q96RU2) · a predicted model of the same protein · chain B against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q96RU2
- Every structure of UniProt P0CG47
- Elsewhere: RCSB PDB 6H4H · PDBe 6H4H · UniProt Q96RU2 · UniProt P0CG47
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