MolNFT v1 · #150552 · protein
Blood group synthase aaglyb in complex with udp-galnac and cryoprotected with peg 3350
6GX1: “Blood group synthase aaglyb in complex with udp-galnac and cryoprotected with peg 3350”. X-ray diffraction, 4 ligands (UD2, UDP, MN). MolNFT v1 #150552 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6GX1
- Type
- protein
- Length
- 285 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- F0X360
- Ligands
- UD2, UDP, MN, SO4
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 285 | — | F0X360 |
Ligands and binding sites
- UD2 · Uridine-diphosphate-N-acetylgalactosamine · ligand · chains A
- UDP · Uridine-5'-diphosphate · ligand · chains A
- MN · Manganese (II) ion · metal · chains A
- SO4 · Sulfate ion · ion · 3 copies · chains A
- PEG · Di(hydroxyethyl)ether · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6GX1 · Blood group synthase AAGlyB in complex with UDP-GalNAc and cryoprotected with PEG 3350 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt F0X360
- Elsewhere: RCSB PDB 6GX1 · PDBe 6GX1 · UniProt F0X360
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