GL1X · GenesisL1 explorer

MolNFT v1 · #150494 · protein

CDK2/CYCLIN A2 in complex with PYRAZOLO[4,3-D]PYRIMIDINE inhibitor LGR4455

6GVA: “CDK2/CYCLIN A2 in complex with PYRAZOLO[4,3-D]PYRIMIDINE inhibitor LGR4455”. X-ray diffraction, 3 ligands (FCQ, CL, BR). MolNFT v1 #150494 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6GVA
Type
protein
Length
546 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P24941, P20248
Ligands
FCQ, CL, BR

Structure

x-ray diffraction · 2 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein288—P24941
B—protein258—P20248

Ligands and binding sites

  • FCQ · 5-(2-azanylethylsulfanyl)-3-propan-2-yl-~{N}-[(4-pyridin-2-ylphenyl)methyl]-2~{H}-pyrazolo[4,3-d]pyrimidin-7-amine · ligand · chains A
  • CL · Chloride ion · ion · chains A
  • BR · Bromide ion · ion · chains A
  • EDO · 1,2-ethanediol · additive · 3 copies · chains A, B
  • PG4 · Tetraethylene glycol · additive · chains B
  • SGM · Monothioglycerol · additive · chains B
  • PGE · Triethylene glycol · additive · chains B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6GVA · CDK2/cyclin A2 in complex with pyrazolo[4,3-d]pyrimidine inhibitor LGR4455 · the same entry in another collection · chain A against A, TM-score 1.00
  • P20248 · AlphaFold monomer V2.0 prediction for cyclin-A2 (P20248) · a predicted model of the same protein · chain B against A, TM-score 0.99
  • P24941 · AlphaFold monomer V2.0 prediction for cyclin-dependent kinase 2 (P24941) · a predicted model of the same protein · chain A against A, TM-score 0.91

Analyse

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.