MolNFT v1 · #150254 · protein
Tdt chimera (LOOP1 of pol mu) - binary complex with ddctp
6GO4: “Tdt chimera (LOOP1 of pol mu) - binary complex with ddctp”. X-ray diffraction, 3 ligands (DCT, NA, MG). MolNFT v1 #150254 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6GO4
- Type
- protein
- Length
- 357 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P09838, Q9JIW4
- Ligands
- DCT, NA, MG
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 357 | — | P09838, Q9JIW4 |
Ligands and binding sites
- DCT · 2',3'-dideoxycytidine 5'-triphosphate · ligand · chains A
- NA · Sodium ion · metal · chains A
- MG · Magnesium ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6GO4 · TdT chimera (Loop1 of pol mu) - binary complex with ddCTP · the same entry in another collection · chain A against A, TM-score 1.00
- P09838 · AlphaFold monomer V2.0 prediction for DNA nucleotidylexotransferase (P09838) · a predicted model of the same protein · chain A against A, TM-score 0.99
- Q9JIW4 · AlphaFold monomer V2.0 prediction for DNA-directed DNA/RNA polymerase mu (Q9JIW4) · a predicted model of the same protein · chain A against A, TM-score 0.93
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P09838
- Every structure of UniProt Q9JIW4
- Elsewhere: RCSB PDB 6GO4 · PDBe 6GO4 · UniProt P09838 · UniProt Q9JIW4
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