MolNFT v1 · #149396 · protein
Aada in complex with ATP, magnesium and streptomycin
6FZB: “Aada in complex with ATP, magnesium and streptomycin”. X-ray diffraction, 4 ligands (SRY, ATP, MG). MolNFT v1 #149396 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6FZB
- Type
- protein
- Length
- 525 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q8ZPX9
- Ligands
- SRY, ATP, MG, CL
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 262 | — | Q8ZPX9 |
| B | — | protein | 263 | — | Q8ZPX9 |
Ligands and binding sites
- SRY · Streptomycin · ligand · 2 copies · chains A, B
- ATP · Adenosine-5'-triphosphate · ligand · 2 copies · chains A, B
- MG · Magnesium ion · metal · 4 copies · chains A, B
- CL · Chloride ion · ion · 2 copies · chains A
- PEG · Di(hydroxyethyl)ether · additive · 2 copies · chains A
- GOL · Glycerol · additive · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6FZB · AadA in complex with ATP, magnesium and streptomycin · the same entry in another collection · chain A against A, TM-score 1.00
- Q8ZPX9 · AlphaFold monomer V2.0 prediction for aminoglycoside (3'') (9) adenylyltransferase… · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8ZPX9
- Elsewhere: RCSB PDB 6FZB · PDBe 6FZB · UniProt Q8ZPX9
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