Ligand · SRY

SRY · Streptomycin

SRY, Streptomycin (C21 H39 N7 O12, 581.6 g/mol), in the MolNFT structures on GenesisL1: bound in 3 records (3 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component: SRY
Formula: C21 H39 N7 O12
Class: ligand
Structures: 3
PDB entries: 3

Binding sites

SRY in 3 structures; the first of them:

5LUH · Aada E87Q in complex with ATP, calcium and streptomycin · SRY A304 · binds ASP47, GLN87, GLN108, TRP112, ASP130, TRP173, ALA177, ASP178 and 4 more
6FUX · Structure of aminoglycoside phosphotransferase APH(3'')-id from streptomyces rimosus… · SRY A303 · binds ASP150, PHE151, LEU152, PRO153, GLU154, ARG157, ASP189, CYS191 and 7 more
6FZB · Aada in complex with ATP, magnesium and streptomycin · SRY A301 · binds GLU87, GLN108, TRP112, ASP130, LEU172, TRP173, ALA177, ASP178 and 4 more

Residues it binds most

ASP 5, TRP 5, GLN 4, THR 5, ALA 4, GLU 3, HIS 4, ILE 4, LEU 3, PRO 1 (residue and the binding sites it lines).

Found with

ATP · Adenosine-5'-triphosphate
CL · Chloride ion
GOL · Glycerol
PEG · Di(hydroxyethyl)ether
ADP · Adenosine-5'-diphosphate
CA · Calcium ion
MG · Magnesium ion
EDO · 1,2-ethanediol

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