MolNFT v1 · #148190 · protein
PDZK1 domain 4 in complex with C-terminal peptide of human PEPT2.
6EZI: “PDZK1 domain 4 in complex with C-terminal peptide of human PEPT2.”. X-ray diffraction. MolNFT v1 #148190 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6EZI
- Type
- protein
- Length
- 94 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q5T2W1, Q16348
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 86 | — | Q5T2W1 |
| B | — | protein | 8 | — | Q16348 |
Ligands and binding sites
- GOL · Glycerol · additive · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6EZI · PDZK1 domain 4 in complex with C-terminal peptide of human PepT2. · the same entry in another collection · chain A against A, TM-score 1.00
- Q5T2W1 · AlphaFold monomer V2.0 prediction for NA(+)/H(+) exchange regulatory cofactor nhe-RF3… · a predicted model of the same protein · chain A against A, TM-score 0.94
- Q16348 · AlphaFold monomer V2.0 prediction for solute carrier family 15 member 2 (Q16348) · a predicted model of the same protein · chain B against A, TM-score 0.79
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5T2W1
- Every structure of UniProt Q16348
- Elsewhere: RCSB PDB 6EZI · PDBe 6EZI · UniProt Q5T2W1 · UniProt Q16348
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