MolNFT v1 · #147864 · protein
Structure of the periplasmic binding protein (pbp) melb (ATU4661) in complex with galactose from agrobacterium tumefacien C58
6EQ0: “Structure of the periplasmic binding protein (pbp) melb (ATU4661) in complex with galactose from…”. X-ray diffraction, 3 ligands (GLA, CA, CL). MolNFT v1 #147864 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6EQ0
- Type
- protein
- Length
- 1,342 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A083ZM57
- Ligands
- GLA, CA, CL
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | protein | 671 | — | A0A083ZM57 |
Ligands and binding sites
- GLA · alpha-D-galactopyranose · sugar · 2 copies · chains A, B
- CA · Calcium ion · metal · 17 copies · chains A, B
- CL · Chloride ion · ion · 16 copies · chains A, B
- EDO · 1,2-ethanediol · additive · 21 copies · chains A, B
- PEG · Di(hydroxyethyl)ether · additive · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6EQ0 · Structure of the periplasmic binding protein (PBP) MelB (atu4661) in complex with… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A083ZM57
- Elsewhere: RCSB PDB 6EQ0 · PDBe 6EQ0 · UniProt A0A083ZM57
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