MolNFT v1 · #147643 · protein
Human xylosyltransferase 1 in complex with peptide paaegsgeqdft
6EJE: “Human xylosyltransferase 1 in complex with peptide paaegsgeqdft”. X-ray diffraction, 2 ligands (NA, PO4). MolNFT v1 #147643 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6EJE
- Type
- protein
- Length
- 704 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q86Y38, P18827
- Ligands
- NA, PO4
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 695 | — | Q86Y38 |
| B | — | protein | 9 | — | P18827 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6EJE · Human Xylosyltransferase 1 in complex with peptide PAAEGSGEQDFT · the same entry in another collection · chain A against A, TM-score 1.00
- Q86Y38 · AlphaFold monomer V2.0 prediction for xylosyltransferase 1 (Q86Y38) · a predicted model of the same protein · chain A against A, TM-score 1.00
- P18827 · AlphaFold monomer V2.0 prediction for syndecan-1 (P18827) · a predicted model of the same protein · chain B against A, TM-score 0.42
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q86Y38
- Every structure of UniProt P18827
- Elsewhere: RCSB PDB 6EJE · PDBe 6EJE · UniProt Q86Y38 · UniProt P18827
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