UniProt P18827
Syndecan-1 (P18827)
Syndecan-1 (UniProt P18827): 5 experimental structures and 1 predicted model on GenesisL1. Binding sites, druggability and experiment against prediction (TM-score) in GL1X.
- UniProt
- P18827
- Protein
- Syndecan-1
- Experimental structures
- 5
- Predicted models
- 1
Structures
6 records of P18827 in the MolNFT archive: 5 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 4GVC | Crystal Structure of T-cell Lymphoma Invasion and Metastasis-1 PDZ in complex with phosphorylated… | x-ray diffraction | B | — | — |
| 4GVC | Crystal structure of T-cell lymphoma invasion and metastasis-1 PDZ in complex with phosphorylated… | x-ray diffraction | B | — | — |
| 4GVD | Crystal Structure of T-cell Lymphoma Invasion and Metastasis-1 PDZ in complex with Syndecan1 Peptide | x-ray diffraction | C, D | — | — |
| 4GVD | Crystal structure of T-cell lymphoma invasion and metastasis-1 PDZ in complex with SYNDECAN1 peptide | x-ray diffraction | C, D | — | — |
| 6EJE | Human xylosyltransferase 1 in complex with peptide paaegsgeqdft | x-ray diffraction | B | — | — |
| P18827 | AlphaFold monomer V2.0 prediction for syndecan-1 (P18827) | predicted | A | — | — |
Experiment against prediction
- 4GVC chain B against the predicted model P18827: TM-score 0.43, RMSD 0.59 Å
- 4GVC chain B against the predicted model P18827: TM-score 0.43, RMSD 0.59 Å
- 6EJE chain B against the predicted model P18827: TM-score 0.42, RMSD 1.81 Å
- 4GVD chain C against the predicted model P18827: TM-score 0.35, RMSD 1.26 Å
- 4GVD chain C against the predicted model P18827: TM-score 0.35, RMSD 1.26 Å
Elsewhere
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.