MolNFT v1 · #147478 · protein

Calmodulin in complex with malbrancheamide

6EEB: “Calmodulin in complex with malbrancheamide”. X-ray diffraction, 3 ligands (J6P, CA, ZN). MolNFT v1 #147478 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6EEB
Type: protein
Length: 142 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: P0DP23
Ligands: J6P, CA, ZN

Structure

x-ray diffraction · 1 distinct chain.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	142	—	P0DP23

Ligands and binding sites

J6P · (5as,12as,13as)-8,9-dichloro-12,12-dimethyl-2,3,11,12, 12A,13-hexahydro-1H,5H,6H-5A,13A-(epiminomethano) indolizino[7,6-b]carbazol-14-one · ligand · chains A
CA · Calcium ion · metal · 4 copies · chains A
ZN · Zinc ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6EEB · Calmodulin in complex with malbrancheamide · the same entry in another collection · chain A against A, TM-score 1.00
P0DP23 · AlphaFold monomer V2.0 prediction for calmodulin-1 (P0DP23) · a predicted model of the same protein · chain A against A, TM-score 0.59

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P0DP23
Elsewhere: RCSB PDB 6EEB · PDBe 6EEB · UniProt P0DP23

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