MolNFT v1 · #147309 · protein
Binary complex of human glycerol 3-phosphate dehydrogenase with NAD
6E8Z: “Binary complex of human glycerol 3-phosphate dehydrogenase with NAD”. X-ray diffraction, 3 ligands (NAD, K, PO4). MolNFT v1 #147309 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6E8Z
- Type
- protein
- Length
- 678 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P21695
- Ligands
- NAD, K, PO4
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 338 | — | P21695 |
| B | — | protein | 340 | — | P21695 |
Ligands and binding sites
- NAD · Nicotinamide-adenine-dinucleotide · ligand · 2 copies · chains A, B
- K · Potassium ion · metal · 2 copies · chains A, B
- PO4 · Phosphate ion · ion · 2 copies · chains A, B
- EDO · 1,2-ethanediol · additive · 4 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6E8Z · Binary complex of Human glycerol 3-phosphate dehydrogenase with NAD · the same entry in another collection · chain A against A, TM-score 1.00
- P21695 · AlphaFold monomer V2.0 prediction for glycerol-3-phosphate dehydrogenase [NAD(+)]… · a predicted model of the same protein · chain A against A, TM-score 0.90
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P21695
- Elsewhere: RCSB PDB 6E8Z · PDBe 6E8Z · UniProt P21695
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