MolNFT v1 · #147308 · protein

Unliganded human glycerol 3-phosphate dehydrogenase

6E8Y: “Unliganded human glycerol 3-phosphate dehydrogenase”. X-ray diffraction, 3 ligands (3SY, K, PO4). MolNFT v1 #147308 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6E8Y
Type: protein
Length: 684 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: P21695
Ligands: 3SY, K, PO4

Structure

x-ray diffraction · 2 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	344	—	P21695
B	—	protein	340	—	P21695

Ligands and binding sites

3SY · 2,2-bis(hydroxymethyl)propane-1,3-diol · ligand · chains A
K · Potassium ion · metal · 2 copies · chains A, B
PO4 · Phosphate ion · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6E8Y · Unliganded Human Glycerol 3-Phosphate Dehydrogenase · the same entry in another collection · chain A against A, TM-score 1.00
P21695 · AlphaFold monomer V2.0 prediction for glycerol-3-phosphate dehydrogenase [NAD(+)]… · a predicted model of the same protein · chain A against A, TM-score 0.89

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P21695
Elsewhere: RCSB PDB 6E8Y · PDBe 6E8Y · UniProt P21695

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