MolNFT v1 · #147034 · protein
X-ray structure of a complex of thaumatin with xylene cyanol
6E0D · Thaumatin I: “X-ray structure of a complex of thaumatin with xylene cyanol”. X-ray diffraction, 1 ligand (XXX). MolNFT v1 #147034 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6E0D
- Type
- protein
- Length
- 206 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Thaumatin I
- UniProt
- P02883
- Ligands
- XXX
Structure
x-ray diffraction · 1 distinct chain · 12% helix, 39% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Thaumatin I | protein | 206 | 12% helix, 39% strand | P02883 |
Ligands and binding sites
- XXX · (1R,2R,3S,4R,6S)-4,6-diamino-2,3-dihydroxycyclohexyl 2, 6-diamino-2,6-dideoxy-alpha-D-glucopyranoside · ligand · chains A
- TLA · L(+)-tartaric acid · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 8 disulfide (disulfide).
Compared structures
- 6E0D · X-ray structure of a complex of thaumatin with xylene cyanol · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P02883
- Elsewhere: RCSB PDB 6E0D · PDBe 6E0D · UniProt P02883
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