MolNFT v1 · #145537 · protein

1.55 a resolution structure of (S)-6-hydroxynicotine oxidase from shinella HZN7

6CR0: “1.55 a resolution structure of (S)-6-hydroxynicotine oxidase from shinella HZN7”. X-ray diffraction, 2 ligands (FAD, CA), 1 pocket (best druggability 0.87). MolNFT v1 #145537 on GenesisL1: 3D structure, binding sites and pockets in…

PDB: 6CR0
Type: protein
Length: 430 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: (S)-6-hydroxynicotine oxidase
EC: 1.5.3.5
UniProt: A0A075BSX9
Ligands: FAD, CA
Pockets: 1 · best druggability 0.87

Structure

x-ray diffraction · 1 distinct chain · 36% helix, 26% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	(S)-6-hydroxynicotine oxidase (EC 1.5.3.5)	protein	430	36% helix, 26% strand	A0A075BSX9

Ligands and binding sites

FAD · Flavin-adenine dinucleotide · ligand · chains A
CA · Calcium ion · metal · 2 copies · chains A
MPD · (4S)-2-methyl-2,4-pentanediol · additive · 3 copies · chains A
ACT · Acetate ion · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	949	0.87	0.88	91	MPD, ACT, FAD

Compared structures

6CR0 · 1.55 A resolution structure of (S)-6-hydroxynicotine oxidase from Shinella HZN7 · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0A075BSX9
Elsewhere: RCSB PDB 6CR0 · PDBe 6CR0 · UniProt A0A075BSX9

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.