MolNFT v1 · #145164 · protein
Crystal structure of KDM4A with compound 14
6CG1: “Crystal structure of KDM4A with compound 14”. X-ray diffraction, 3 ligands (QC1, NI, ZN). MolNFT v1 #145164 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6CG1
- Type
- protein
- Length
- 1,370 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- O75164
- Ligands
- QC1, NI, ZN
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | protein | 347 | — | O75164 |
| C | — | protein | 335 | — | O75164 |
| D | — | protein | 341 | — | O75164 |
Ligands and binding sites
- QC1 · 3-{[(4-fluorophenyl)methyl]amino}pyridine-4-carboxylic acid · ligand · 4 copies · chains A, B, C, D
- NI · Nickel (II) ion · metal · 4 copies · chains A, B, C, D
- ZN · Zinc ion · metal · 4 copies · chains A, B, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6CG1 · Crystal Structure of KDM4A with Compound 14 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O75164
- Elsewhere: RCSB PDB 6CG1 · PDBe 6CG1 · UniProt O75164
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