MolNFT v1 · #143204 · protein

REV1 UBM2 domain complex with ubiquitin

6ASR: “REV1 UBM2 domain complex with ubiquitin”. X-ray diffraction, 1 ligand (NI). MolNFT v1 #143204 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6ASR
Type: protein
Length: 189 residues
Chains: 3
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: P0CG47, Q9UBZ9
Ligands: NI

Structure

x-ray diffraction · 3 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	76	—	P0CG47
B	—	protein	39	—	Q9UBZ9
C	—	protein	74	—	P0CG47

Ligands and binding sites

NI · Nickel (II) ion · metal · 4 copies · chains A, B, C

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6ASR · REV1 UBM2 domain complex with ubiquitin · the same entry in another collection · chain A against A, TM-score 1.00
Q9UBZ9 · AlphaFold monomer V2.0 prediction for DNA repair protein REV1 (Q9UBZ9) · a predicted model of the same protein · chain B against A, TM-score 0.74

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P0CG47
Every structure of UniProt Q9UBZ9
Elsewhere: RCSB PDB 6ASR · PDBe 6ASR · UniProt P0CG47 · UniProt Q9UBZ9

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