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MolNFT v1 · #142671 · protein

Rat xanthine oxidoreductase, NAD bound form

6ABU: “Rat xanthine oxidoreductase, NAD bound form”. X-ray diffraction, 5 ligands (FES, NAD, URC). MolNFT v1 #142671 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6ABU
Type
protein
Length
2,595 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P22985
Ligands
FES, NAD, URC, BCT, FAD

Structure

x-ray diffraction · 2 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein1304—P22985
B—protein1291—P22985

Ligands and binding sites

  • FES · Fe2/s2 (inorganic) cluster · ligand · 4 copies · chains A, B
  • NAD · Nicotinamide-adenine-dinucleotide · ligand · 2 copies · chains A, B
  • URC · Uric acid · ligand · 2 copies · chains A, B
  • BCT · Bicarbonate ion · ligand · 2 copies · chains A, B
  • FAD · Flavin-adenine dinucleotide · ligand · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6ABU · Rat Xanthine oxidoreductase, NAD bound form · the same entry in another collection · chain A against A, TM-score 1.00
  • P22985 · AlphaFold monomer V2.0 prediction for xanthine DEHYDROGENASE/OXIDASE (P22985) · a predicted model of the same protein · chain A against A, TM-score 1.00

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