MolNFT v1 · #140832 · protein
Crystal structure of an aromatic prenyltransferase FAMD1 from fischerella ambigua utex 1903 in complex with inn
5YNU: “Crystal structure of an aromatic prenyltransferase FAMD1 from fischerella ambigua utex 1903 in complex with…”. X-ray diffraction, 3 ligands (8XL, POP, DMA). MolNFT v1 #140832 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 5YNU
- Type
- protein
- Length
- 607 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- V5TDY7
- Ligands
- 8XL, POP, DMA
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 296 | — | V5TDY7 |
| B | — | protein | 311 | — | V5TDY7 |
Ligands and binding sites
- 8XL · 3-[(Z)-2-isocyanoethenyl]-1H-indole · ligand · 2 copies · chains A, B
- POP · Pyrophosphate 2- · ligand · chains A
- DMA · Dimethylallyl diphosphate · ligand · chains B
- IMD · Imidazole · additive · 5 copies · chains A, B
- GOL · Glycerol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5YNU · Crystal structure of an aromatic prenyltransferase FAMD1 from Fischerella ambigua UTEX… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt V5TDY7
- Elsewhere: RCSB PDB 5YNU · PDBe 5YNU · UniProt V5TDY7
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