MolNFT v1 · #140784 · protein
Crystal structure of SET7/9 in complex with a cyproheptadine derivative
5YLT: “Crystal structure of SET7/9 in complex with a cyproheptadine derivative”. X-ray diffraction, 1 ligand (C7N). MolNFT v1 #140784 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5YLT
- Type
- protein
- Length
- 248 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q8WTS6
- Ligands
- C7N
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 248 | — | Q8WTS6 |
Ligands and binding sites
- C7N · 2-(1-methylpiperidin-4-ylidene)tricyclo[9.4.0.0^{3, 8}]pentadeca-1(11),3(8),4,6,9,12,14-heptaen-6-ol · ligand · chains A
- GOL · Glycerol · additive · 3 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5YLT · Crystal structure of SET7/9 in complex with a cyproheptadine derivative · the same entry in another collection · chain A against A, TM-score 1.00
- Q8WTS6 · AlphaFold monomer V2.0 prediction for histone-lysine N-methyltransferase SETD7 (Q8WTS6) · a predicted model of the same protein · chain A against A, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8WTS6
- Elsewhere: RCSB PDB 5YLT · PDBe 5YLT · UniProt Q8WTS6
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.