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MolNFT v1 · #140730 · protein

Mismatch repair protein

5YK4: “Mismatch repair protein”. X-ray diffraction, 1 ligand (ADP). MolNFT v1 #140730 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
5YK4
Type
protein
Length
1,538 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
Q5F5J4
Ligands
ADP

Structure

x-ray diffraction · 2 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein771—Q5F5J4
B—protein767—Q5F5J4

Ligands and binding sites

  • ADP · Adenosine-5'-diphosphate · ligand · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 5YK4 · Mismatch Repair Protein · the same entry in another collection · chain A against A, TM-score 1.00
  • Q5F5J4 · AlphaFold monomer V2.0 prediction for DNA mismatch repair protein muts (Q5F5J4) · a predicted model of the same protein · chain A against A, TM-score 0.98

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