MolNFT v1 · #140620 · protein
Monomeric structure of concanavalin a at pH 7.5 from carnivalia ensiformis
5YGM · Concanavalin-a: “Monomeric structure of concanavalin a at pH 7.5 from carnivalia ensiformis”. X-ray diffraction, 2 ligands (CA, MN). MolNFT v1 #140620 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5YGM
- Type
- protein
- Length
- 237 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Concanavalin-a
- UniProt
- P02866
- Ligands
- CA, MN
Structure
x-ray diffraction · 1 distinct chain · 4% helix, 47% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Concanavalin-a | protein | 237 | 4% helix, 47% strand | P02866 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5YGM · Monomeric structure of concanavalin A at pH 7.5 from Carnivalia ensiformis · the same entry in another collection · chain A against A, TM-score 1.00
- P02866 · AlphaFold monomer V2.0 prediction for concanavalin-a (P02866) · a predicted model of the same protein · chain A against A, TM-score 0.50
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P02866
- Elsewhere: RCSB PDB 5YGM · PDBe 5YGM · UniProt P02866
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