MolNFT v1 · #140571 · protein

Crystal structure of CARNMT1 bound to SAM

5YF0: “Crystal structure of CARNMT1 bound to SAM”. X-ray diffraction, 1 ligand (CA). MolNFT v1 #140571 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5YF0
Type: protein
Length: 689 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: Q8N4J0
Ligands: CA

Structure

x-ray diffraction · 2 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	337	—	Q8N4J0
B	—	protein	352	—	Q8N4J0

Ligands and binding sites

CA · Calcium ion · metal · 2 copies · chains B
EDO · 1,2-ethanediol · additive · 4 copies · chains A, B
ACT · Acetate ion · additive · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

5YF0 · Crystal structure of CARNMT1 bound to SAM · the same entry in another collection · chain B against B, TM-score 1.00
Q8N4J0 · AlphaFold monomer V2.0 prediction for carnosine N-methyltransferase (Q8N4J0) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8N4J0
Elsewhere: RCSB PDB 5YF0 · PDBe 5YF0 · UniProt Q8N4J0

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