MolNFT v1 · #140222 · protein + DNA
Cryo-EM structure of human DNA-pk holoenzyme
5Y3R: “Cryo-EM structure of human DNA-pk holoenzyme”. Electron microscopy. MolNFT v1 #140222 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5Y3R
- Type
- protein + DNA
- Length
- 4,740 residues
- Chains
- 6
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P12956, P13010, P78527
Structure
electron microscopy · 6 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 493 | — | P12956 |
| B | — | protein | 526 | — | P13010 |
| K | — | protein | 15 | — | — |
| D | — | dna | 34 | — | — |
| E | — | dna | 36 | — | — |
| C | — | protein | 3636 | — | P78527 |
Compared structures
- 5Y3R · Cryo-EM structure of Human DNA-PK Holoenzyme · the same entry in another collection · chain B against B, TM-score 1.00
- P13010 · AlphaFold monomer V2.0 prediction for X-ray repair cross- complementing protein 5 (P13010) · a predicted model of the same protein · chain B against A, TM-score 0.95
- P12956 · AlphaFold monomer V2.0 prediction for X-ray repair cross- complementing protein 6 (P12956) · a predicted model of the same protein · chain A against A, TM-score 0.78
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P12956
- Every structure of UniProt P13010
- Every structure of UniProt P78527
- Elsewhere: RCSB PDB 5Y3R · PDBe 5Y3R · UniProt P12956 · UniProt P13010 · UniProt P78527
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