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MolNFT v1 · #139735 · protein

Thanatin Y10M21AA in complex with lps

5XOK: “Thanatin Y10M21AA in complex with lps”. Solution nmr. MolNFT v1 #139735 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
5XOK
Type
protein
Length
42 residues
Chains
2
Method
solution nmr
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Thanatin
UniProt
P55788

Structure

solution nmr · 1 distinct chain · 0% helix, 38% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
A, BThanatinprotein210% helix, 38% strandP55788

Interfaces

1 interface between chains.

  • A–B · 330 Ų buried · 2 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 2 disulfide (disulfide).

Compared structures

  • 5XOK · Thanatin Y10M21AA in complex with LPS · the same entry in another collection · chain A against A, TM-score 1.00
  • P55788 · AlphaFold monomer V2.0 prediction for thanatin (P55788) · a predicted model of the same protein · chain A against A, TM-score 0.23

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