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Thanatin Y10M21AA in complex with lps

Analyse Thanatin Y10M21AA in complex with lps in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 5XOK
Type: protein
Length: 42 residues
Chains: 2
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Thanatin
UniProt: P55788

Structure

solution nmr · 1 distinct chain · 0% helix, 38% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Thanatin	protein	21	0% helix, 38% strand	P55788

Interfaces

1 interface between chains.

A–B · 330 Å² buried · 2 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 2 disulfide (disulfide).

Compared structures

5XOK · Thanatin Y10M21AA in complex with LPS · the same entry in another collection · chain A against A, TM-score 1.00
P55788 · AlphaFold monomer V2.0 prediction for thanatin (P55788) · a predicted model of the same protein · chain A against A, TM-score 0.23

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P55788
Elsewhere: RCSB PDB 5XOK · PDBe 5XOK · UniProt P55788

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