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MolNFT v1 · #138342 · protein

Human GRK2 in complex with gbetagamma subunits and CCG257284

5WG4: “Human GRK2 in complex with gbetagamma subunits and CCG257284”. X-ray diffraction, 1 ligand (AFV). MolNFT v1 #138342 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
5WG4
Type
protein
Length
1,019 residues
Chains
3
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P25098, P62871, P63212
Ligands
AFV

Structure

x-ray diffraction · 3 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein621—P25098
B—protein339—P62871
G—protein59—P63212

Ligands and binding sites

  • AFV · 2-fluoro-5-[(3S,4R)-3-{[(1H-indazol-5-yl) oxy]methyl}piperidin-4-yl]-N-[(pyridin-2-yl) methyl]benzamide · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 5WG4 · Human GRK2 in complex with Gbetagamma subunits and CCG257284 · the same entry in another collection · chain A against A, TM-score 1.00
  • P62871 · AlphaFold monomer V2.0 prediction for guanine nucleotide-binding protein G(I)/G(S)/G(T)… · a predicted model of the same protein · chain B against A, TM-score 0.99
  • P25098 · AlphaFold monomer V2.0 prediction for beta-adrenergic receptor kinase 1 (P25098) · a predicted model of the same protein · chain A against A, TM-score 0.98
  • P63212 · AlphaFold monomer V2.0 prediction for guanine nucleotide-binding protein G(I)/G(S)/G(O)… · a predicted model of the same protein · chain G against A, TM-score 0.67

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