MolNFT v1 · #138078 · protein
Structure of phosphorylated WNK1
5W7T · SERINE/THREONINE-protein kinase WNK1: “Structure of phosphorylated WNK1”. X-ray diffraction, 1 ligand (ANP), 3 pockets (best druggability 0.65). MolNFT v1 #138078 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5W7T
- Type
- protein
- Length
- 554 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- SERINE/THREONINE-protein kinase WNK1
- EC
- 2.7.11.1
- UniProt
- Q9JIH7
- Ligands
- ANP
- Pockets
- 3 · best druggability 0.65
Structure
x-ray diffraction · 1 distinct chain · 41% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | SERINE/THREONINE-protein kinase WNK1 (EC 2.7.11.1) | protein | 277 | 41% helix, 20% strand | Q9JIH7 |
Ligands and binding sites
- ANP · Phosphoaminophosphonic acid-adenylate ester · ligand · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
3 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 334 | 0.65 | 0.80 | 46 | ANP |
| 2 | 299 | 0.65 | 0.81 | 39 | ANP |
| 3 | 345 | 0.62 | 0.78 | 49 | empty |
Interfaces
1 interface between chains.
- A–B · 397 Ų buried · 6 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 2 modified (phosphorylation).
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9JIH7
- Elsewhere: RCSB PDB 5W7T · PDBe 5W7T · UniProt Q9JIH7
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