MolNFT v1 · #136964 · protein
Structure of the H477R variant of rat cytosolic pepck in complex with oxalate and GTP.
5V9G: “Structure of the H477R variant of rat cytosolic pepck in complex with oxalate and GTP.”. X-ray diffraction, 4 ligands (GTP, OXL, MN). MolNFT v1 #136964 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5V9G
- Type
- protein
- Length
- 620 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P07379
- Ligands
- GTP, OXL, MN, NA
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 620 | — | P07379 |
Ligands and binding sites
- GTP · Guanosine-5'-triphosphate · ligand · chains A
- OXL · Oxalate ion · ligand · chains A
- MN · Manganese (II) ion · metal · 2 copies · chains A
- NA · Sodium ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5V9G · Structure of the H477R variant of rat cytosolic PEPCK in complex with oxalate and GTP. · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P07379
- Elsewhere: RCSB PDB 5V9G · PDBe 5V9G · UniProt P07379
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