MolNFT v1 · #136518 · protein
Serial millisecond crystallography of membrane and soluble protein micro-crystals using synchrotron radiation
5UVL · Proteinase K: “Serial millisecond crystallography of membrane and soluble protein micro-crystals using synchrotron radiation”. X-ray diffraction, 2 ligands (CA, NO3), 1 pocket (best druggability 0.41). MolNFT v1 #136518 on…
- PDB
- 5UVL
- Type
- protein
- Length
- 279 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Proteinase K
- EC
- 3.4.21.64
- UniProt
- P06873
- Ligands
- CA, NO3
- Pockets
- 1 · best druggability 0.41
Structure
x-ray diffraction · 1 distinct chain · 27% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Proteinase K (EC 3.4.21.64) | protein | 279 | 27% helix, 24% strand | P06873 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 102 | 0.41 | 0.77 | 25 | NO3 |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Compared structures
- 5UVL · Serial Millisecond Crystallography of Membrane and Soluble Protein Micro-crystals using… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P06873
- Elsewhere: RCSB PDB 5UVL · PDBe 5UVL · UniProt P06873
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