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MolNFT v1 · #136390 · protein

Wild type rat cypor bound with NADP+ - oxidized form

5URD: “Wild type rat cypor bound with NADP+ - oxidized form”. X-ray diffraction, 4 ligands (FMN, FAD, NAP). MolNFT v1 #136390 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
5URD
Type
protein
Length
1,214 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P00388
Ligands
FMN, FAD, NAP, PO4

Structure

x-ray diffraction · 2 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein609—P00388
B—protein605—P00388

Ligands and binding sites

  • FMN · Flavin mononucleotide · ligand · 2 copies · chains A, B
  • FAD · Flavin-adenine dinucleotide · ligand · 2 copies · chains A, B
  • NAP · Nadp nicotinamide-adenine-dinucleotide phosphate · ligand · 2 copies · chains A, B
  • PO4 · Phosphate ion · ion · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 5URD · wild type rat CYPOR bound with NADP+ - oxidized form · the same entry in another collection · chain A against A, TM-score 1.00
  • P00388 · AlphaFold monomer V2.0 prediction for NADPH--cytochrome P450 reductase (P00388) · a predicted model of the same protein · chain A against A, TM-score 1.00

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