MolNFT v1 · #135679 · protein
Modified single helix from the B-domain of protein a bound to IGG1 Fc
5U66: “Modified single helix from the B-domain of protein a bound to IGG1 Fc”. X-ray diffraction, 4 ligands (NAG, MAN, BMA). MolNFT v1 #135679 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5U66
- Type
- protein
- Length
- 221 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q6MZV7
- Ligands
- NAG, MAN, BMA, GAL
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B | — | protein | 14 | — | — |
| A | — | protein | 207 | — | Q6MZV7 |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 3 copies · chains A
- MAN · alpha-D-mannopyranose · sugar · 2 copies · chains A
- BMA · beta-D-mannopyranose · sugar · chains A
- GAL · beta-D-galactopyranose · sugar · chains A
- SIN · Succinic acid · additive · chains B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5U66 · Modified single helix from the B-domain of protein A bound to IgG1 Fc · the same entry in another collection · chain B against B, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6MZV7
- Elsewhere: RCSB PDB 5U66 · PDBe 5U66 · UniProt Q6MZV7
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.