MolNFT v1 · #134932 · protein
Crystal structure of gtb + B trisaccharide (native)
5TJN: “Crystal structure of gtb + B trisaccharide (native)”. X-ray diffraction, 3 ligands (HSH, FUC, GLA). MolNFT v1 #134932 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5TJN
- Type
- protein
- Length
- 278 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P16442
- Ligands
- HSH, FUC, GLA
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 278 | — | P16442 |
Ligands and binding sites
- HSH · octyl beta-D-galactopyranoside · ligand · chains A
- FUC · alpha-L-fucopyranose · sugar · chains A
- GLA · alpha-D-galactopyranose · sugar · chains A
- MPD · (4S)-2-methyl-2,4-pentanediol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5TJN · Crystal structure of GTB + B trisaccharide (native) · the same entry in another collection · chain A against A, TM-score 1.00
- P16442 · AlphaFold monomer V2.0 prediction for histo-blood group abo system transferase (P16442) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P16442
- Elsewhere: RCSB PDB 5TJN · PDBe 5TJN · UniProt P16442
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