MolNFT v1 · #13470 · protein
NMR minimized average structure of microcystin-lr
1LCM · Microcystin lr: “NMR minimized average structure of microcystin-lr”. Solution nmr, 3 ligands (1ZN, FGA, DAM). MolNFT v1 #13470 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 1LCM
- Type
- protein
- Length
- 4 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Microcystin lr
- Ligands
- 1ZN, FGA, DAM
Structure
solution nmr · 1 distinct chain · 0% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Microcystin lr | protein | 4 | 0% helix, 0% strand | — |
Ligands and binding sites
- 1ZN · (2S,3S,4E,6E,8S,9S)-3-amino-9-methoxy-2,6,8-trimethyl-10-phenyldeca-4,6-dienoic acid · ligand · chains A
- FGA · Gamma-D-glutamic acid · ligand · chains A
- DAM · N-methyl-alpha-beta-dehydroalanine · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 2 covalent, 1 d-amino, 1 modified (covalent ligand, D-amino acid, nonstandard).
Compared structures
- 1LCM · NMR minimized average structure of microcystin-LR · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 1LCM · PDBe 1LCM
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