MolNFT v1 · #13426 · protein
TRAF6-CD40 complex
1LB6 · TNF receptor-associated factor 6: “TRAF6-CD40 complex”. X-ray diffraction. MolNFT v1 #13426 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 1LB6
- Type
- protein
- Length
- 164 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- TNF receptor-associated factor 6; CD40 antigen
- UniProt
- Q9Y4K3, P25942
Structure
x-ray diffraction · 2 distinct chains · 12% helix, 41% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | TNF receptor-associated factor 6 | protein | 155 | 13% helix, 41% strand | Q9Y4K3 |
| B | CD40 antigen | protein | 9 | 0% helix, 44% strand | P25942 |
Interfaces
1 interface between chains.
- A–B · 609 Ų buried · 14 hydrogen bonds · protein-protein
Compared structures
- 1LB6 · TRAF6-CD40 Complex · the same entry in another collection · chain A against A, TM-score 1.00
- Q9Y4K3 · AlphaFold monomer V2.0 prediction for TNF receptor-associated factor 6 (Q9Y4K3) · a predicted model of the same protein · chain A against A, TM-score 0.96
- P25942 · AlphaFold monomer V2.0 prediction for tumor necrosis factor receptor superfamily member 5… · a predicted model of the same protein · chain B against A, TM-score 0.39
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9Y4K3
- Every structure of UniProt P25942
- Elsewhere: RCSB PDB 1LB6 · PDBe 1LB6 · UniProt Q9Y4K3 · UniProt P25942
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