MolNFT v1 · #129802 · protein
PDZ domain from rat SHANK3 bound to the C terminus of gkap
5OVC: “PDZ domain from rat SHANK3 bound to the C terminus of gkap”. X-ray diffraction, 2 ligands (ACE, CL). MolNFT v1 #129802 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5OVC
- Type
- protein
- Length
- 102 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q9JLU4
- Ligands
- ACE, CL
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 96 | — | Q9JLU4 |
| B | — | protein | 6 | — | — |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5OVC · PDZ domain from rat Shank3 bound to the C terminus of GKAP · the same entry in another collection · chain A against A, TM-score 1.00
- Q9JLU4 · AlphaFold monomer V2.0 prediction for SH3 and multiple ankyrin repeat domains protein 3… · a predicted model of the same protein · chain A against A, TM-score 0.94
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9JLU4
- Elsewhere: RCSB PDB 5OVC · PDBe 5OVC · UniProt Q9JLU4
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