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MolNFT v1 · #129799 · protein

Crystal structure of acetylcholinesterase in complex with crystal violet

5OV9: “Crystal structure of acetylcholinesterase in complex with crystal violet”. X-ray diffraction, 4 ligands (CVI, ETX, AE3). MolNFT v1 #129799 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
5OV9
Type
protein
Length
1,065 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P21836
Ligands
CVI, ETX, AE3, NAG

Structure

x-ray diffraction · 2 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein534—P21836
B—protein531—P21836

Ligands and binding sites

  • CVI · Crystal violet · ligand · 4 copies · chains A, B
  • ETX · 2-ethoxyethanol · ligand · 3 copies · chains A, B
  • AE3 · 2-(2-ethoxyethoxy)ethanol · ligand · chains A, B
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 2 copies · chains A, B
  • EDO · 1,2-ethanediol · additive · 4 copies · chains A, B
  • PG0 · 2-(2-methoxyethoxy)ethanol · additive · 2 copies · chains A, B
  • PEG · Di(hydroxyethyl)ether · additive · chains B
  • PGE · Triethylene glycol · additive · chains B
  • PE4 · 2-{2-[2-(2-{2-[2-(2-ethoxy-ethoxy)-ethoxy]-ethoxy}-ethoxy)-ethoxy]-ethoxy}-ethanol · additive · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 5OV9 · Crystal structure of Acetylcholinesterase in complex with Crystal Violet · the same entry in another collection · chain A against A, TM-score 1.00
  • P21836 · AlphaFold monomer V2.0 prediction for acetylcholinesterase (P21836) · a predicted model of the same protein · chain B against A, TM-score 1.00

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