MolNFT v1 · #129587 · protein
Structure of the MTR4 NOP53 complex
5OOQ: “Structure of the MTR4 NOP53 complex”. X-ray diffraction, 1 ligand (SO4). MolNFT v1 #129587 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5OOQ
- Type
- protein
- Length
- 1,927 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P47047, Q12080
- Ligands
- SO4
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 952 | — | P47047 |
| B | — | protein | 949 | — | P47047 |
| C | — | protein | 12 | — | Q12080 |
| D | — | protein | 14 | — | Q12080 |
Ligands and binding sites
- SO4 · Sulfate ion · ion · 5 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5OOQ · Structure of the Mtr4 Nop53 Complex · the same entry in another collection · chain D against D, TM-score 1.00
- P47047 · AlphaFold monomer V2.0 prediction for ATP-dependent RNA helicase DOB1 (P47047) · a predicted model of the same protein · chain B against A, TM-score 0.81
- Q12080 · AlphaFold monomer V2.0 prediction for ribosome biogenesis protein NOP53 (Q12080) · a predicted model of the same protein · chain C against A, TM-score 0.40
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P47047
- Every structure of UniProt Q12080
- Elsewhere: RCSB PDB 5OOQ · PDBe 5OOQ · UniProt P47047 · UniProt Q12080
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