MolNFT v1 · #129343 · protein
Globin sensor domain of afgchk (feiii form) in complex with cyanide, partially reduced
5OHF: “Globin sensor domain of afgchk (feiii form) in complex with cyanide, partially reduced”. X-ray diffraction, 4 ligands (HEM, NA, CYN). MolNFT v1 #129343 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5OHF
- Type
- protein
- Length
- 1,207 residues
- Chains
- 8
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A7HD43
- Ligands
- HEM, NA, CYN, CL
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, D, E, H | — | protein | 152 | — | A7HD43 |
| C | — | protein | 147 | — | A7HD43 |
| F | — | protein | 153 | — | A7HD43 |
| G | — | protein | 147 | — | A7HD43 |
Ligands and binding sites
- HEM · Protoporphyrin IX containing Fe · ligand · 8 copies · chains A, B, C, D, E, F, G, H
- NA · Sodium ion · metal · chains E
- CYN · Cyanide ion · ion · 8 copies · chains A, B, C, D, E, F, G, H
- CL · Chloride ion · ion · 5 copies · chains A, B, C, D, F, E, G, H
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5OHF · Globin sensor domain of AfGcHK (FeIII form) in complex with cyanide, partially reduced · the same entry in another collection · chain H against H, TM-score 1.00
- A7HD43 · AlphaFold monomer V2.0 prediction for globin-coupled histidine kinase (A7HD43) · a predicted model of the same protein · chain E against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A7HD43
- Elsewhere: RCSB PDB 5OHF · PDBe 5OHF · UniProt A7HD43
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.