GL1X · GenesisL1 explorer

MolNFT v1 · #128993 · protein

Structure of PHOSPHOY371 C-cbl in complex with ZAP70-peptide and UBV.PCBL ubiquitin variant

5O76: “Structure of PHOSPHOY371 C-cbl in complex with ZAP70-peptide and UBV.PCBL ubiquitin variant”. X-ray diffraction, 2 ligands (ZN, CA). MolNFT v1 #128993 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
5O76
Type
protein
Length
935 residues
Chains
6
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P22681
Ligands
ZN, CA

Structure

x-ray diffraction · 6 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein385—P22681
B—protein7——
C—protein387—P22681
D—protein9——
E—protein73——
F—protein74——

Ligands and binding sites

  • ZN · Zinc ion · metal · 4 copies · chains A, C
  • CA · Calcium ion · metal · 2 copies · chains A, C

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 5O76 · Structure of phosphoY371 c-CBL in complex with ZAP70-peptide and UbV.pCBL ubiquitin… · the same entry in another collection · chain F against F, TM-score 1.00
  • P22681 · AlphaFold monomer V2.0 prediction for E3 ubiquitin-protein ligase cbl (P22681) · a predicted model of the same protein · chain A against A, TM-score 0.97

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