MolNFT v1 · #128765 · protein
ADP-dependent glucokinase from pyrococcus horikoshii
5O0J: “ADP-dependent glucokinase from pyrococcus horikoshii”. X-ray diffraction, 2 ligands (8BR, GLC). MolNFT v1 #128765 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5O0J
- Type
- protein
- Length
- 453 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- O58328
- Ligands
- 8BR, GLC
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 453 | — | O58328 |
Ligands and binding sites
- 8BR · 8-bromo-adenosine-5'-monophosphate · ligand · 2 copies · chains A
- GLC · alpha-D-glucopyranose · sugar · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5O0J · ADP-dependent glucokinase from Pyrococcus horikoshii · the same entry in another collection · chain A against A, TM-score 1.00
- O58328 · AlphaFold monomer V2.0 prediction for ADP-dependent GLUCOSE/GLUCOSAMINE kinase (O58328) · a predicted model of the same protein · chain A against A, TM-score 0.92
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O58328
- Elsewhere: RCSB PDB 5O0J · PDBe 5O0J · UniProt O58328
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