MolNFT v1 · #128345 · protein
The structure of ll-37 crystallized in the presence ldao
5NNK · Cathelicidin antimicrobial peptide: “The structure of ll-37 crystallized in the presence ldao”. X-ray diffraction. MolNFT v1 #128345 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5NNK
- Type
- protein
- Length
- 34 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Cathelicidin antimicrobial peptide
- UniProt
- P49913
Structure
x-ray diffraction · 1 distinct chain · 74% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Cathelicidin antimicrobial peptide | protein | 34 | 74% helix, 0% strand | P49913 |
Ligands and binding sites
- LDA · Lauryl dimethylamine-N-oxide · additive · 3 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5NNK · The structure of LL-37 crystallized in the presence LDAO · the same entry in another collection · chain A against A, TM-score 1.00
- P49913 · AlphaFold monomer V2.0 prediction for cathelicidin antimicrobial peptide (P49913) · a predicted model of the same protein · chain A against A, TM-score 0.65
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P49913
- Elsewhere: RCSB PDB 5NNK · PDBe 5NNK · UniProt P49913
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