MolNFT v1 · #128013 · protein
Crystal structure of a thermostabilised human protease-activated receptor-2 (PAR2) in complex with AZ3451 at 3.6 ångström resolution
5NDZ: “Crystal structure of a thermostabilised human protease-activated receptor-2 (PAR2) in complex with AZ3451 at…”. X-ray diffraction, 2 ligands (8UN, NA). MolNFT v1 #128013 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5NDZ
- Type
- protein
- Length
- 556 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- D9IEF7, P55085, P0ABE7
- Ligands
- 8UN, NA
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 556 | — | D9IEF7, P55085, P0ABE7 |
Ligands and binding sites
- 8UN · 2-(6-bromanyl-1,3-benzodioxol-5-yl)-~{N}-(4-cyanophenyl)-1-[(1~{S})-1-cyclohexylethyl]benzimidazole-5-carboxamide · ligand · chains A
- NA · Sodium ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5NDZ · Crystal structure of a thermostabilised human protease-activated receptor-2 (PAR2) in… · the same entry in another collection · chain A against A, TM-score 1.00
- P55085 · AlphaFold monomer V2.0 prediction for proteinase-activated receptor 2 (P55085) · a predicted model of the same protein · chain A against A, TM-score 0.55
- P0ABE7 · AlphaFold monomer V2.0 prediction for soluble cytochrome B562 (P0ABE7) · a predicted model of the same protein · chain A against A, TM-score 0.20
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt D9IEF7
- Every structure of UniProt P55085
- Every structure of UniProt P0ABE7
- Elsewhere: RCSB PDB 5NDZ · PDBe 5NDZ · UniProt D9IEF7 · UniProt P55085 · UniProt P0ABE7
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.