MolNFT v1 · #126867 · protein
The crystal structure of E. COLI aminopeptidase N in complex with 7- amino-5,7,8,9-tetrahydrobenzocyclohepten-6-one
5MFR: “The crystal structure of E. COLI aminopeptidase N in complex with 7…”. X-ray diffraction, 4 ligands (7MK, NA, ZN). MolNFT v1 #126867 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5MFR
- Type
- protein
- Length
- 868 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P04825
- Ligands
- 7MK, NA, ZN, CL
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 868 | — | P04825 |
Ligands and binding sites
- 7MK · [(7~{S})-6,6-bis(oxidanyl)-5,7,8,9-tetrahydrobenzo[7]annulen-7-yl]azanium · ligand · chains A
- NA · Sodium ion · metal · 8 copies · chains A
- ZN · Zinc ion · metal · chains A
- CL · Chloride ion · ion · 3 copies · chains A
- GOL · Glycerol · additive · 10 copies · chains A
- MLI · Malonate ion · additive · 4 copies · chains A
- DMS · Dimethyl sulfoxide · additive · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P04825
- Elsewhere: RCSB PDB 5MFR · PDBe 5MFR · UniProt P04825
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.