MolNFT v1 · #126329 · protein
Structure of the domain of unknown function DUF1669 from human FAM83B
5LZK · Protein FAM83B: “Structure of the domain of unknown function DUF1669 from human FAM83B”. X-ray diffraction, 1 ligand (IOD), 1 pocket (best druggability 0.54). MolNFT v1 #126329 on GenesisL1: 3D structure, binding sites and pockets…
- PDB
- 5LZK
- Type
- protein
- Length
- 338 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Protein FAM83B
- UniProt
- Q5T0W9
- Ligands
- IOD
- Pockets
- 1 · best druggability 0.54
Structure
x-ray diffraction · 1 distinct chain · 34% helix, 31% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Protein FAM83B | protein | 169 | 34% helix, 31% strand | Q5T0W9 |
Ligands and binding sites
- IOD · Iodide ion · ion · 4 copies · chains A
- EDO · 1,2-ethanediol · additive · 7 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 163 | 0.54 | 0.80 | 31 | IOD |
Interfaces
1 interface between chains.
- A–B · 1463 Ų buried · 25 hydrogen bonds · protein-protein
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5T0W9
- Elsewhere: RCSB PDB 5LZK · PDBe 5LZK · UniProt Q5T0W9
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