MolNFT v1 · #125077 · protein

Mouse POFUT1 in complex with EGF(+) and GDP

5KY5: “Mouse POFUT1 in complex with EGF(+) and GDP”. X-ray diffraction, 2 ligands (GDP, NAG). MolNFT v1 #125077 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5KY5
Type: protein
Length: 392 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: Q91ZW2
Ligands: GDP, NAG

Structure

x-ray diffraction · 2 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	352	—	Q91ZW2
B	—	protein	40	—	—

Ligands and binding sites

GDP · Guanosine-5'-diphosphate · ligand · chains A
NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 2 copies · chains A
GOL · Glycerol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

5KY5 · mouse POFUT1 in complex with EGF(+) and GDP · the same entry in another collection · chain A against A, TM-score 1.00
Q91ZW2 · AlphaFold monomer V2.0 prediction for GDP-fucose protein O-fucosyltransferase 1 (Q91ZW2) · a predicted model of the same protein · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q91ZW2
Elsewhere: RCSB PDB 5KY5 · PDBe 5KY5 · UniProt Q91ZW2

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