MolNFT v1 · #124561 · protein

YENB/RHS2 complex

5KIS: “YENB/RHS2 complex”. X-ray diffraction, 3 ligands (CA, NA, CL). MolNFT v1 #124561 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5KIS
Type: protein
Length: 2,121 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: B6A880
Ligands: CA, NA, CL

Structure

x-ray diffraction · 2 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	1446	—	B6A880
B	—	protein	675	—	—

Ligands and binding sites

CA · Calcium ion · metal · 2 copies · chains A, B
NA · Sodium ion · metal · 2 copies · chains A, B
CL · Chloride ion · ion · 4 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

5KIS · YenB/RHS2 complex · the same entry in another collection · chain A against A, TM-score 1.00
B6A880 · AlphaFold monomer V2.0 prediction for toxin subunit yenb (B6A880) · a predicted model of the same protein · chain A against A, TM-score 0.96

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt B6A880
Elsewhere: RCSB PDB 5KIS · PDBe 5KIS · UniProt B6A880

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